Add FlashDeconv to Spot Deconvolution section #1

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cafferychen777 wants to merge 1 commit into SindiLab:main from cafferychen777:add-flashdeconv

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cafferychen777 commented Dec 26, 2025

Summary

Add FlashDeconv to the Machine Learning/Statistical Approaches section under Spot Deconvolution.

FlashDeconv uses structure-preserving randomized sketching (not deep learning) for high-performance spatial transcriptomics deconvolution:

Linear O(N) scaling: Processes 1M spots in ~3 minutes
Designed for high-resolution platforms: Visium HD, Stereo-seq, etc.
Python package: Available on PyPI (pip install flashdeconv)

Links:

GitHub: https://github.com/cafferychen777/flashdeconv
Paper: https://doi.org/10.64898/2025.12.22.696108


          Add FlashDeconv to Spot Deconvolution section

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