[JOSS] dev to master before release

CMakeLists.txt

@@ -199,7 +199,7 @@ endif()
 # ----------------------------------
 # Main Project Executable
 # ----------------------------------
-set(INTERPRETER tools/forefire/ForeFire.cpp tools/forefire/AdvancedLineEditor.cpp)
+set(INTERPRETER app/forefire/ForeFire.cpp app/forefire/AdvancedLineEditor.cpp)
 add_executable(forefire ${INTERPRETER})
 if(DEFINED NETCDF_STATIC_LIBS)
     if(MPI_FOUND)

Dockerfile

@@ -19,8 +19,13 @@ RUN pip3 install --no-cache-dir lxml xarray netCDF4
 WORKDIR /forefire
 ENV FOREFIREHOME=/forefire
 
-# we could only copy src, cmakelists.txt and cmake-build.sh
-COPY . .
+# Copy build configuration first (rarely changes)
+COPY CMakeLists.txt cmake-build.sh LICENSE ./
+
+# Copy source code and applications
+COPY src/ ./src/
+COPY app/ ./app/
+COPY tools/runANN/ ./tools/runANN/
 
 # Build and install the ForeFire C++ library
 RUN sh cmake-build.sh
@@ -29,7 +34,16 @@ RUN sh cmake-build.sh
 RUN cp /forefire/bin/forefire /usr/local/bin/
 
 # Use pip to install the Python bindings
+COPY bindings/ ./bindings/
 RUN pip3 install ./bindings/python
 
+# Copy everything else (changes most frequently - docs, tests, etc.)
+COPY . .
+
+# WE COULD USE A CUSTOM ENTRYPOINT SCRIPT TO START THE HTTP SERVER AND RUN THE DEMO SIMULATION
+# COPY tools/devops/entrypoint.sh /usr/local/bin/entrypoint.sh
+# RUN chmod +x /usr/local/bin/entrypoint.sh
+# ENTRYPOINT ["/usr/local/bin/entrypoint.sh"]
+
 # Set the entrypoint to bash for interactive sessions
 CMD ["bash"]

paper/paper.md

@@ -59,6 +59,7 @@ authors:
     corresponding: false
   - name: Antonio Leblanc
     affiliation: 4
+    orcid: 0009-0001-9043-2039
     corresponding: false
   - name: Alberto Alonso-Pinar
     orcid: 0009-0009-2051-9700

src/include/Version.h

@@ -1,3 +1,3 @@
 #pragma once
-const char* ff_version = "v2.2.0";
+const char* ff_version = "v2.2.1";
 

tools/devops/entrypoint.sh

@@ -0,0 +1,34 @@
+#!/bin/bash
+set -e
+
+echo "🔥 ForeFire Quick Start Demo"
+echo "=============================="
+echo ""
+
+# Navigate to the test directory
+cd /forefire/tests/runff
+
+echo "📁 Working directory: $(pwd)"
+echo "🌐 Starting ForeFire with HTTP server..."
+echo ""
+echo "Once started, open your browser to: http://localhost:8000"
+echo "To run the demo simulation, type: include[real_case.ff]"
+echo "To stop, press Ctrl+C"
+echo ""
+
+# Function to handle graceful shutdown
+cleanup() {
+    echo ""
+    echo "🛑 Shutting down ForeFire..."
+    exit 0
+}
+
+# Set up signal handlers for graceful shutdown
+trap cleanup SIGINT SIGTERM
+
+# Start forefire and automatically launch HTTP server
+forefire -l &
+FOREFIRE_PID=$!
+
+# Wait for the forefire process
+wait $FOREFIRE_PID