feat: support apptainer (in particular avoid warnings) #1
Conversation
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
wdconinc
force-pushed
the
apptainer-support
branch
from
32b8dd1 to
7d68306
Compare
wdconinc
commented
Apr 16, 2024
veprbl
reviewed
Nov 11, 2025
veprbl
reviewed
Nov 11, 2025
There was a problem hiding this comment.
Pull request overview
This PR adds support for Apptainer to prevent warnings when SINGULARITY_* and APPTAINER_* environment variables differ. The changes prioritize Apptainer over Singularity when both are available, set corresponding APPTAINER_* environment variables alongside existing SINGULARITY_* variables, and update user-facing messages and documentation to reflect support for both tools.
Changes:
- Added APPTAINER_TMPDIR and APPTAINER_BINDPATH environment variable exports
- Modified binary detection logic to prefer Apptainer over Singularity
- Updated error messages, help text, and comments to reference Apptainer alongside Singularity
💡 Add Copilot custom instructions for smarter, more guided reviews. Learn how to get started.
Co-authored-by: Dmitry Kalinkin <dmitry.kalinkin@gmail.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
wdconinc
force-pushed
the
apptainer-support
branch
from
d5d6068 to
e875bf6
Compare
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Briefly, what does this PR introduce?
Apptainer warns when SINGULARITY_* and APPTAINER_* variables are different. This will make the user experience smoother with fewer warnings.
What kind of change does this PR introduce?
Please check if this PR fulfills the following:
Does this PR introduce breaking changes? What changes might users need to make to their code?
No.
Does this PR change default behavior?
No.