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@twalsh-ebi twalsh-ebi commented Jan 18, 2026

Description

This pull request would update special handling of species names, primarily to restrict the set of cases in which the special handling is done, with a view to improving presentation of species names.

Views affected

Gene-tree stats views

Plants staging view of gene-tree stats:
staging_plants_ptree_stats

Plants sandbox view of gene-tree stats:
sandbox_plants_ptree_stats

Vertebrates staging view of gene-tree stats:
staging_verts_ptree_stats

Vertebrates sandbox view of gene-tree stats:
sandbox_verts_ptree_stats

Orthologues view

Vertebrates staging view of species without orthologues:
staging_ciona_species_sans_ortho

Vertebrates sandbox view of species without orthologues:
sandbox_ciona_species_sans_ortho

Vertebrates staging view of Pig breeds without orthologues:
staging_pig_species_sans_ortho

Vertebrates sandbox view of Pig breeds without orthologues:
sandbox_pig_species_sans_ortho

Pairwise whole-genome alignment listing page

Vertebrates staging view of the pairwise alignment list page:
staging_ciona_alignments

Vertebrates sandbox view of the pairwise alignment list page:
sandbox_ciona_alignments

Region in detail

Vertebrates staging Region in detail view:
staging_pig_region_in_detail

Vertebrates sandbox Region in detail view:
sandbox_pig_region_in_detail

Possible complications

None expected.

Merge conflicts

None detected.

Related JIRA Issues (EBI developers only)

  • N/A

@azangru azangru merged commit a862a9c into Ensembl:main Jan 20, 2026
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2 participants